PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1624s0002.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 282aa    MW: 31488.6 Da    PI: 4.1694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1624s0002.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.12.9e-153385156
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         s+++GV  ++ +grW+A+I  +     +k+ +lg++ t eeAa+a+++a+ +++g+
  Kalax.1624s0002.2.p 33 SKFRGVAKHHHNGRWEARIGRVLG---NKYLYLGTYSTQEEAAAAYDRAAIQYRGA 85
                         79****************988422...5*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.91E-163394No hitNo description
SuperFamilySSF541712.22E-173394IPR016177DNA-binding domain
PfamPF008471.2E-103384IPR001471AP2/ERF domain
PROSITE profilePS5103217.243492IPR001471AP2/ERF domain
SMARTSM003801.4E-263498IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-183493IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MYRKEMEEMQ KLSREEYLAT LRRRSSGFSR GVSKFRGVAK HHHNGRWEAR IGRVLGNKYL  60
YLGTYSTQEE AAAAYDRAAI QYRGANAVTN FDVSNYADLL IKKDLAEEAG NEEQVVADEQ  120
PQPLNLKAET DAQCQENKKG IDVIDHLPKC EEAFDPYAST TDQVSVEDHG MMNEHDFSWD  180
LNLDPDFSEL PMPNLSDIAE SCCELQCELP ALFDDYTGFE DNLDFMFTSG LEENMFDLGD  240
GEKGNGASTS LPIMTSSTSS SSISCLSTSP SNSYSYDDYL V*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015876174.14e-62PREDICTED: ethylene-responsive transcription factor WRI1-like
TrEMBLA0A068V5Q41e-62A0A068V5Q4_COFCA; Uncharacterized protein
STRINGPOPTR_0010s25340.13e-56(Populus trichocarpa)
STRINGBra003178.1-P8e-56(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.22e-38ERF family protein